Project Dependencies

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

GroupIdArtifactIdVersionTypeLicense
com.db4odb4o-all8.0.249jar-
com.h2databaseh21.3.170jarThe H2 License, Version 1.0
commons-clicommons-cli1.2jarThe Apache Software License, Version 2.0
net.sf.maltcmscross-math1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmsmaltcms-datastructures1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmsmaltcms-io1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmsmaltcms-io-csv1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmsmaltcms-io-openms-featurexml1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcms.net.sf.jexcelapijxl-osgi2.6.12jarL-GPL v3-Eclipse Public License (EPL)
org.codehaus.groovygroovy-all1.8.9jarThe Apache Software License, Version 2.0

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

GroupIdArtifactIdVersionTypeLicense
junitjunit4.11jarCommon Public License Version 1.0
net.sf.maltcmscross-test1.3.0jarL-GPL v3-Eclipse Public License (EPL)

provided

The following is a list of provided dependencies for this project. These dependencies are required to compile the application, but should be provided by default when using the library:

GroupIdArtifactIdVersionTypeLicense
org.projectlomboklombok0.11.8jarThe MIT License

Project Transitive Dependencies

The following is a list of transitive dependencies for this project. Transitive dependencies are the dependencies of the project dependencies.

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

GroupIdArtifactIdVersionTypeLicense
acs.lbl.govcolt-osgi1.2.0jar-
com.carrotsearchhppc0.5.2jarThe Apache Software License, Version 2.0
com.github.stephenc.high-scale-libhigh-scale-lib1.1.4jarPublic Domain
com.sun.xml.bindjaxb-impl2.1.12jar-
commons-codeccommons-codec1.5jarThe Apache Software License, Version 2.0
commons-configurationcommons-configuration1.9jarThe Apache Software License, Version 2.0
commons-iocommons-io2.4jarThe Apache Software License, Version 2.0
commons-langcommons-lang2.6jarThe Apache Software License, Version 2.0
edu.ucar.unidatanetcdf-osgi4.2.35jar-
javax.activationactivation1.1jarCommon Development and Distribution License (CDDL) v1.0
javax.media.jaicom.springsource.javax.media.jai.codec1.1.3jar-
javax.media.jaicom.springsource.javax.media.jai.core1.1.3jar-
javax.xml.bindjaxb-api2.1jar-
javax.xml.streamstax-api1.0-2jarGNU General Public Library-COMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0
log4jlog4j1.2.17jarThe Apache Software License, Version 2.0
net.sf.ehcacheehcache2.7.2jarsrc/assemble/EHCACHE-CORE-LICENSE.txt
net.sf.maltcmscross-annotations1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmscross-cache1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmscross-event1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmscross-exception1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmscross-main1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmscross-tools1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmsmaltcms-cv1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmsmaltcms-filters1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmsmaltcms-io-netcdf1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmsmaltcms-xml-alignment1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.maltcmsmaltcms-xml-annotation1.3.0jarL-GPL v3-Eclipse Public License (EPL)
net.sf.mpaxsmpaxs-api1.6.16jarGNU Lesser General Public License (LGPL)-Eclipse Public License (EPL)
net.sf.mpaxsmpaxs-computeHost1.6.16jarGNU Lesser General Public License (LGPL)-Eclipse Public License (EPL)
net.sf.mpaxsmpaxs-drmaa-spi1.6.16jarGNU Lesser General Public License (LGPL)-Eclipse Public License (EPL)
net.sf.mpaxsmpaxs-server1.6.16jarGNU Lesser General Public License (LGPL)-Eclipse Public License (EPL)
net.sf.mpaxsmpaxs-spi1.6.16jarGNU Lesser General Public License (LGPL)-Eclipse Public License (EPL)
net.sourceforge.jexcelapijxl2.6.12jarGNU Lesser General Public License
org.aopalliancecom.springsource.org.aopalliance1.0.0jar-
org.apache.commonscom.springsource.org.apache.commons.httpclient3.1.0jar-
org.apache.commonscom.springsource.org.apache.commons.logging1.1.1jar-
org.apache.commonscommons-math2.2jarThe Apache Software License, Version 2.0
org.gff.drmaasun-drmaa-impl-osgi1.0.0jar-
org.jdomcom.springsource.org.jdom1.1.0jar-
org.jfreejcommon1.0.17jarGNU Lesser General Public Licence
org.jfreejfreechart1.0.14jarGNU Lesser General Public Licence
org.jfreejfreechart-osgi1.0.14.1jarL-GPL v3-Eclipse Public License (EPL)
org.netbeans.apiorg-openide-util-lookup-osgi7.1.0jar-
org.slf4jslf4j-api1.7.2jarMIT License
org.slf4jslf4j-log4j121.7.2jarMIT License
org.springframeworkorg.springframework.aop3.2.1.RELEASEjar-
org.springframeworkorg.springframework.beans3.2.1.RELEASEjar-
org.springframeworkorg.springframework.context3.2.1.RELEASEjar-
org.springframeworkorg.springframework.core3.2.1.RELEASEjar-
org.springframeworkorg.springframework.expression3.2.1.RELEASEjar-
org.swinglabsswing-layout-osgi1.0.3jar-
xml-apisxml-apis1.3.04jarThe Apache Software License, Version 2.0

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

GroupIdArtifactIdVersionTypeLicense
org.hamcresthamcrest-core1.3jarNew BSD License

Project Dependency Graph

Dependency Tree

  • net.sf.maltcms:maltcms-evaluation:jar:1.3.0 Information
    • net.sf.maltcms:maltcms-datastructures:jar:1.3.0 (compile) Information
      • net.sf.maltcms:maltcms-xml-alignment:jar:1.3.0 (compile) Information
      • org.apache.commons:commons-math:jar:2.2 (compile) Information
      • net.sf.maltcms:maltcms-xml-annotation:jar:1.3.0 (compile) Information
        • com.sun.xml.bind:jaxb-impl:jar:2.1.12 (compile) Information
      • acs.lbl.gov:colt-osgi:jar:1.2.0 (compile) Information
      • net.sf.maltcms:maltcms-io:jar:1.3.0 (compile) Information
      • net.sf.maltcms:maltcms-filters:jar:1.3.0 (compile) Information
      • org.jfree:jfreechart-osgi:jar:1.0.14.1 (compile) Information
        • org.jfree:jfreechart:jar:1.0.14 (compile) Information
          • org.jfree:jcommon:jar:1.0.17 (compile) Information
          • xml-apis:xml-apis:jar:1.3.04 (compile) Information
        • org.jfree:jcommon:jar:1.0.17 (compile) Information
      • javax.media.jai:com.springsource.javax.media.jai.codec:jar:1.1.3 (compile) Information
        • javax.media.jai:com.springsource.javax.media.jai.codec:jar:1.1.3 (compile) Information
        • javax.media.jai:com.springsource.javax.media.jai.core:jar:1.1.3 (compile) Information
      • javax.media.jai:com.springsource.javax.media.jai.core:jar:1.1.3 (compile) Information
        • javax.media.jai:com.springsource.javax.media.jai.core:jar:1.1.3 (compile) Information
        • javax.media.jai:com.springsource.javax.media.jai.codec:jar:1.1.3 (compile) Information
      • com.github.stephenc.high-scale-lib:high-scale-lib:jar:1.1.4 (compile) Information
      • com.carrotsearch:hppc:jar:0.5.2 (compile) Information
    • commons-cli:commons-cli:jar:1.2 (compile) Information
    • com.h2database:h2:jar:1.3.170 (compile) Information
    • net.sf.maltcms:maltcms-io:jar:1.3.0 (compile) Information
      • net.sf.maltcms:maltcms-cv:jar:1.3.0 (compile) Information
    • net.sf.maltcms.net.sf.jexcelapi:jxl-osgi:jar:2.6.12 (compile) Information
    • net.sf.maltcms:maltcms-io-openms-featurexml:jar:1.3.0 (compile) Information
      • com.sun.xml.bind:jaxb-impl:jar:2.1.12 (compile) Information
        • javax.xml.bind:jaxb-api:jar:2.1 (compile) Information
    • org.codehaus.groovy:groovy-all:jar:1.8.9 (compile) Information
    • net.sf.maltcms:cross-math:jar:1.3.0 (compile) Information
    • com.db4o:db4o-all:jar:8.0.249 (compile) Information
    • net.sf.maltcms:maltcms-io-csv:jar:1.3.0 (compile) Information
      • net.sf.maltcms:maltcms-io-netcdf:jar:1.3.0 (compile) Information
        • org.apache.commons:com.springsource.org.apache.commons.httpclient:jar:3.1.0 (compile) Information
          • org.apache.commons:com.springsource.org.apache.commons.logging:jar:1.1.1 (compile) Information
        • net.sf.maltcms:cross-main:jar:1.3.0 (compile) Information
      • net.sf.maltcms:maltcms-io:jar:1.3.0 (compile) Information
      • net.sf.maltcms:maltcms-datastructures:jar:1.3.0 (compile) Information
    • net.sf.maltcms:cross-test:jar:1.3.0 (test) Information
    • org.projectlombok:lombok:jar:0.11.8 (provided) Information
    • junit:junit:jar:4.11 (test) Information

Licenses

GNU Lesser General Public License (LGPL): mpaxs-api, mpaxs-computeHost, mpaxs-drmaa-spi, mpaxs-server, mpaxs-spi

Public Domain: Highly Scalable Java

New BSD License: Hamcrest Core

Unknown: colt-osgi, com.springsource.javax.media.jai.codec, com.springsource.javax.media.jai.core, com.springsource.org.aopalliance, com.springsource.org.apache.commons.httpclient, com.springsource.org.apache.commons.logging, com.springsource.org.jdom, db4o-all, jaxb-api, jaxb-impl, netcdf-osgi, org-openide-util-lookup-osgi, org.springframework.aop, org.springframework.beans, org.springframework.context, org.springframework.core, org.springframework.expression, sun-drmaa-impl-osgi, swing-layout-osgi

Eclipse Public License (EPL): Cross Annotations, Cross Cache, Cross Events, Cross Exceptions, Cross Main, Cross Math, Cross Test, Cross Tools, JFreeChart OSGI, JXL OSGI, Maltcms Controlled Vocabulary, Maltcms Datastructures, Maltcms Evaluation, Maltcms Filters, Maltcms IO, Maltcms IO Provider CSV, Maltcms IO Provider NetCDF, Maltcms IO Provider OpenMS FeatureXML, Maltcms Xml Alignment Format, Maltcms Xml Annotation Format, mpaxs-api, mpaxs-computeHost, mpaxs-drmaa-spi, mpaxs-server, mpaxs-spi

COMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0: Streaming API for XML

The Apache Software License, Version 2.0: Apache Log4j, Commons CLI, Commons Codec, Commons Configuration, Commons IO, Commons Lang, Commons Math, Groovy, HPPC Collections, XML Commons External Components XML APIs, ehcache

GNU Lesser General Public License: jxl

L-GPL v3: Cross Annotations, Cross Cache, Cross Events, Cross Exceptions, Cross Main, Cross Math, Cross Test, Cross Tools, JFreeChart OSGI, JXL OSGI, Maltcms Controlled Vocabulary, Maltcms Datastructures, Maltcms Evaluation, Maltcms Filters, Maltcms IO, Maltcms IO Provider CSV, Maltcms IO Provider NetCDF, Maltcms IO Provider OpenMS FeatureXML, Maltcms Xml Alignment Format, Maltcms Xml Annotation Format

GNU Lesser General Public Licence: JCommon, JFreeChart

The H2 License, Version 1.0: H2 Database Engine

GNU General Public Library: Streaming API for XML

Common Public License Version 1.0: JUnit

MIT License: SLF4J API Module, SLF4J LOG4J-12 Binding

The MIT License: Project Lombok

Common Development and Distribution License (CDDL) v1.0: JavaBeans Activation Framework (JAF)