maltcms.datastructures.cluster
Class Peak1DBidiBestHitsCriterion.Peak1DSimilarities

java.lang.Object
  maltcms.datastructures.cluster.Peak1DBidiBestHitsCriterion.Peak1DSimilarities

Enclosing class:

Peak1DBidiBestHitsCriterion

public class Peak1DBidiBestHitsCriterion.Peak1DSimilarities
extends Object

Constructor Summary

Peak1DBidiBestHitsCriterion.Peak1DSimilarities(List<Peak1D> peaks, IArrayD2Double sims)

Method Summary

int	getBestHitForLhs(int i)
int	getBestHitForRhs(int j)
HashMap<Integer,Integer>	getBestHitsForLhs()
HashMap<Integer,Integer>	getBestHitsForRhs()
Set<Point>	getBidirectionalBestHits()
boolean	isBidirectionalBestHit(int lhs, int rhs)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Peak1DBidiBestHitsCriterion.Peak1DSimilarities

public Peak1DBidiBestHitsCriterion.Peak1DSimilarities(List<Peak1D> peaks,
                                                      IArrayD2Double sims)

Method Detail

getBestHitForLhs

public int getBestHitForLhs(int i)

getBestHitForRhs

public int getBestHitForRhs(int j)

getBestHitsForLhs

public HashMap<Integer,Integer> getBestHitsForLhs()

getBestHitsForRhs

public HashMap<Integer,Integer> getBestHitsForRhs()

isBidirectionalBestHit

public boolean isBidirectionalBestHit(int lhs,
                                      int rhs)

getBidirectionalBestHits

public Set<Point> getBidirectionalBestHits()