Uses of Class
smueller.alignment.Alignment

Packages that use Alignment
smueller.alignment   
smueller.datastructure   
 

Uses of Alignment in smueller.alignment
 

Subclasses of Alignment in smueller.alignment
 class AffineAlignment
           
 class OneAffineAlignment
           
 

Uses of Alignment in smueller.datastructure
 

Methods in smueller.datastructure with parameters of type Alignment
 void AlignmentOutput.writefile(String a, String b, Vector<OptimalAlignmentVector> all, double[][] matrix, String format, double[][] dima, String location, int alnumber, Alignment ali, int aoriglen, int boriglen, cross.datastructures.workflow.IWorkflow iw)
           
 



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