Uses of Class
smueller.alignment.OptimalAlignmentVector

Packages that use OptimalAlignmentVector

Package	Description
smueller.alignment
smueller.datastructure

Uses of OptimalAlignmentVector in smueller.alignment

Methods in smueller.alignment that return types with arguments of type OptimalAlignmentVector

Modifier and Type	Method and Description
Vector<OptimalAlignmentVector>	Alignment.getAllalignments()

Uses of OptimalAlignmentVector in smueller.datastructure

Method parameters in smueller.datastructure with type arguments of type OptimalAlignmentVector

Modifier and Type	Method and Description
void	AlignmentOutput.writefile(String a, String b, Vector<OptimalAlignmentVector> all, double[][] matrix, String format, double[][] dima, String location, int alnumber, Alignment ali, int aoriglen, int boriglen, IWorkflow iw)